Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc28a2O88627 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc28a2O88627 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc28a2O88627 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc28a2O88627 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc28a2O88627 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc28a2O88627 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.29■■□□□ 1
Slc28a2O88627 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.29■■□□□ 1
Slc28a2O88627 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc28a2O88627 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc28a2O88627 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc28a2O88627 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.27■■□□□ 1
Slc28a2O88627 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc28a2O88627 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc28a2O88627 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc28a2O88627 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Slc28a2O88627 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc28a2O88627 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.27■□□□□ 0.99
Slc28a2O88627 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc28a2O88627 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc28a2O88627 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc28a2O88627 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
Slc28a2O88627 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Slc28a2O88627 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Slc28a2O88627 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.25■□□□□ 0.99
Slc28a2O88627 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Slc28a2O88627 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slc28a2O88627 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc28a2O88627 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.24■□□□□ 0.99
Slc28a2O88627 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc28a2O88627 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc28a2O88627 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc28a2O88627 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc28a2O88627 Zfp131-205ENSMUST00000223812 663 ntBASIC21.23■□□□□ 0.99
Slc28a2O88627 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc28a2O88627 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc28a2O88627 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc28a2O88627 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.21■□□□□ 0.99
Slc28a2O88627 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Slc28a2O88627 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc28a2O88627 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc28a2O88627 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc28a2O88627 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.19■□□□□ 0.98
Slc28a2O88627 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc28a2O88627 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.18■□□□□ 0.98
Slc28a2O88627 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc28a2O88627 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.17■□□□□ 0.98
Slc28a2O88627 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc28a2O88627 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc28a2O88627 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc28a2O88627 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Slc28a2O88627 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slc28a2O88627 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc28a2O88627 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.15■□□□□ 0.98
Slc28a2O88627 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Slc28a2O88627 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc28a2O88627 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc28a2O88627 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Slc28a2O88627 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc28a2O88627 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slc28a2O88627 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.14■□□□□ 0.97
Slc28a2O88627 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc28a2O88627 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc28a2O88627 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc28a2O88627 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc28a2O88627 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc28a2O88627 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc28a2O88627 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc28a2O88627 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc28a2O88627 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.1■□□□□ 0.97
Slc28a2O88627 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc28a2O88627 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc28a2O88627 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc28a2O88627 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc28a2O88627 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc28a2O88627 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.08■□□□□ 0.97
Slc28a2O88627 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc28a2O88627 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc28a2O88627 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc28a2O88627 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc28a2O88627 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc28a2O88627 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc28a2O88627 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.06■□□□□ 0.96
Slc28a2O88627 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc28a2O88627 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Slc28a2O88627 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc28a2O88627 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc28a2O88627 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.05■□□□□ 0.96
Slc28a2O88627 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc28a2O88627 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc28a2O88627 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc28a2O88627 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.04■□□□□ 0.96
Slc28a2O88627 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc28a2O88627 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc28a2O88627 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc28a2O88627 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc28a2O88627 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc28a2O88627 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Slc28a2O88627 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Slc28a2O88627 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms