Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Nr1i3O35627 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
Nr1i3O35627 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nr1i3O35627 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.31■■□□□ 1.8
Nr1i3O35627 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nr1i3O35627 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.29■■□□□ 1.8
Nr1i3O35627 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nr1i3O35627 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nr1i3O35627 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Nr1i3O35627 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nr1i3O35627 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nr1i3O35627 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nr1i3O35627 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Nr1i3O35627 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Nr1i3O35627 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nr1i3O35627 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nr1i3O35627 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nr1i3O35627 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.23■■□□□ 1.79
Nr1i3O35627 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nr1i3O35627 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nr1i3O35627 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nr1i3O35627 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.21■■□□□ 1.79
Nr1i3O35627 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Nr1i3O35627 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Nr1i3O35627 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Nr1i3O35627 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Nr1i3O35627 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nr1i3O35627 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Nr1i3O35627 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nr1i3O35627 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Nr1i3O35627 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nr1i3O35627 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Nr1i3O35627 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.12■■□□□ 1.77
Nr1i3O35627 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nr1i3O35627 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Nr1i3O35627 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nr1i3O35627 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nr1i3O35627 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Nr1i3O35627 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nr1i3O35627 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Nr1i3O35627 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nr1i3O35627 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Nr1i3O35627 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.07■■□□□ 1.76
Nr1i3O35627 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nr1i3O35627 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Nr1i3O35627 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nr1i3O35627 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Nr1i3O35627 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Nr1i3O35627 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nr1i3O35627 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Nr1i3O35627 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nr1i3O35627 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nr1i3O35627 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nr1i3O35627 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nr1i3O35627 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Nr1i3O35627 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.03■■□□□ 1.76
Nr1i3O35627 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nr1i3O35627 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nr1i3O35627 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nr1i3O35627 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Nr1i3O35627 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nr1i3O35627 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Nr1i3O35627 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Nr1i3O35627 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Nr1i3O35627 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.98■■□□□ 1.75
Nr1i3O35627 Zfp131-205ENSMUST00000223812 663 ntBASIC25.97■■□□□ 1.75
Nr1i3O35627 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
Nr1i3O35627 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Nr1i3O35627 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.96■■□□□ 1.75
Nr1i3O35627 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Nr1i3O35627 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Nr1i3O35627 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Nr1i3O35627 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Nr1i3O35627 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Nr1i3O35627 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Nr1i3O35627 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.94■■□□□ 1.74
Nr1i3O35627 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.94■■□□□ 1.74
Nr1i3O35627 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Nr1i3O35627 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Nr1i3O35627 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nr1i3O35627 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nr1i3O35627 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nr1i3O35627 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nr1i3O35627 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.9■■□□□ 1.74
Nr1i3O35627 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nr1i3O35627 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.74
Nr1i3O35627 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.89■■□□□ 1.74
Nr1i3O35627 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Nr1i3O35627 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Nr1i3O35627 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nr1i3O35627 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nr1i3O35627 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Nr1i3O35627 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nr1i3O35627 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nr1i3O35627 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
Nr1i3O35627 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Nr1i3O35627 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.87■■□□□ 1.73
Nr1i3O35627 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.87■■□□□ 1.73
Nr1i3O35627 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.87■■□□□ 1.73
Nr1i3O35627 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms