Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Abca4O35600 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Abca4O35600 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Abca4O35600 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Abca4O35600 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Abca4O35600 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Abca4O35600 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Abca4O35600 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.03■■□□□ 1.44
Abca4O35600 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.02■■□□□ 1.44
Abca4O35600 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Abca4O35600 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Abca4O35600 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Abca4O35600 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.01■■□□□ 1.43
Abca4O35600 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abca4O35600 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abca4O35600 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Abca4O35600 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24■■□□□ 1.43
Abca4O35600 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24■■□□□ 1.43
Abca4O35600 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Abca4O35600 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Abca4O35600 Gm7332-201ENSMUST00000118351 454 ntBASIC23.99■■□□□ 1.43
Abca4O35600 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Abca4O35600 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Abca4O35600 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Abca4O35600 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Abca4O35600 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Abca4O35600 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Abca4O35600 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.96■■□□□ 1.43
Abca4O35600 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.96■■□□□ 1.43
Abca4O35600 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Abca4O35600 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.95■■□□□ 1.42
Abca4O35600 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Abca4O35600 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Abca4O35600 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Abca4O35600 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Abca4O35600 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.91■■□□□ 1.42
Abca4O35600 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Abca4O35600 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Abca4O35600 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Abca4O35600 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Abca4O35600 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.89■■□□□ 1.42
Abca4O35600 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.89■■□□□ 1.42
Abca4O35600 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.88■■□□□ 1.41
Abca4O35600 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Abca4O35600 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abca4O35600 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abca4O35600 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Abca4O35600 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
Abca4O35600 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.86■■□□□ 1.41
Abca4O35600 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.85■■□□□ 1.41
Abca4O35600 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Abca4O35600 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.85■■□□□ 1.41
Abca4O35600 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Abca4O35600 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Abca4O35600 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.83■■□□□ 1.41
Abca4O35600 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Abca4O35600 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Abca4O35600 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Abca4O35600 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Abca4O35600 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Abca4O35600 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Abca4O35600 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Abca4O35600 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Abca4O35600 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.81■■□□□ 1.4
Abca4O35600 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.81■■□□□ 1.4
Abca4O35600 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Abca4O35600 Gm4799-201ENSMUST00000095396 657 ntBASIC23.79■■□□□ 1.4
Abca4O35600 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Abca4O35600 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Abca4O35600 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Abca4O35600 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.77■■□□□ 1.4
Abca4O35600 Gm16437-201ENSMUST00000025669 507 ntBASIC23.77■■□□□ 1.4
Abca4O35600 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abca4O35600 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abca4O35600 Gm11687-201ENSMUST00000118911 886 ntBASIC23.76■■□□□ 1.39
Abca4O35600 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Abca4O35600 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Abca4O35600 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Abca4O35600 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Abca4O35600 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Abca4O35600 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Abca4O35600 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Abca4O35600 Scarna2-201ENSMUST00000157560 414 ntBASIC23.73■■□□□ 1.39
Abca4O35600 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.73■■□□□ 1.39
Abca4O35600 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.73■■□□□ 1.39
Abca4O35600 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Abca4O35600 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Abca4O35600 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Abca4O35600 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.71■■□□□ 1.39
Abca4O35600 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.7■■□□□ 1.38
Abca4O35600 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Abca4O35600 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Abca4O35600 Gm15546-201ENSMUST00000122095 826 ntBASIC23.7■■□□□ 1.38
Abca4O35600 Gm9806-201ENSMUST00000051080 552 ntBASIC23.69■■□□□ 1.38
Abca4O35600 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Abca4O35600 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Abca4O35600 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Abca4O35600 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.67■■□□□ 1.38
Abca4O35600 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Abca4O35600 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms