Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebi3O35228 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ebi3O35228 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebi3O35228 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebi3O35228 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebi3O35228 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Ebi3O35228 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ebi3O35228 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ebi3O35228 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebi3O35228 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ebi3O35228 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebi3O35228 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebi3O35228 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebi3O35228 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ebi3O35228 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebi3O35228 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebi3O35228 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebi3O35228 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.71■□□□□ 0.59
Ebi3O35228 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ebi3O35228 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ebi3O35228 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ebi3O35228 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.68■□□□□ 0.58
Ebi3O35228 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebi3O35228 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebi3O35228 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ebi3O35228 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebi3O35228 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebi3O35228 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ebi3O35228 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebi3O35228 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebi3O35228 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebi3O35228 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.63■□□□□ 0.57
Ebi3O35228 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebi3O35228 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebi3O35228 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ebi3O35228 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.61■□□□□ 0.57
Ebi3O35228 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ebi3O35228 Zfp131-205ENSMUST00000223812 663 ntBASIC18.6■□□□□ 0.57
Ebi3O35228 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebi3O35228 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.59■□□□□ 0.57
Ebi3O35228 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ebi3O35228 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ebi3O35228 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebi3O35228 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.57■□□□□ 0.56
Ebi3O35228 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ebi3O35228 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebi3O35228 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ebi3O35228 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ebi3O35228 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Ebi3O35228 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ebi3O35228 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.55■□□□□ 0.56
Ebi3O35228 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ebi3O35228 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ebi3O35228 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.53■□□□□ 0.56
Ebi3O35228 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebi3O35228 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebi3O35228 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebi3O35228 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ebi3O35228 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ebi3O35228 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ebi3O35228 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ebi3O35228 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ebi3O35228 Gm9397-201ENSMUST00000200125 605 ntBASIC18.51■□□□□ 0.55
Ebi3O35228 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.5■□□□□ 0.55
Ebi3O35228 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.5■□□□□ 0.55
Ebi3O35228 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ebi3O35228 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ebi3O35228 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Ebi3O35228 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ebi3O35228 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.49■□□□□ 0.55
Ebi3O35228 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.48■□□□□ 0.55
Ebi3O35228 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ebi3O35228 Gm24970-201ENSMUST00000175582 82 ntBASIC18.47■□□□□ 0.55
Ebi3O35228 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ebi3O35228 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ebi3O35228 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.47■□□□□ 0.55
Ebi3O35228 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ebi3O35228 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ebi3O35228 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ebi3O35228 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ebi3O35228 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ebi3O35228 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ebi3O35228 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.45■□□□□ 0.54
Ebi3O35228 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.45■□□□□ 0.54
Ebi3O35228 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.45■□□□□ 0.54
Ebi3O35228 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ebi3O35228 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ebi3O35228 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebi3O35228 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.43■□□□□ 0.54
Ebi3O35228 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebi3O35228 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.43■□□□□ 0.54
Ebi3O35228 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ebi3O35228 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ebi3O35228 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebi3O35228 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebi3O35228 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ebi3O35228 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.42■□□□□ 0.54
Ebi3O35228 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebi3O35228 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebi3O35228 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms