Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Tnfrsf11bO08712 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Tnfrsf11bO08712 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tnfrsf11bO08712 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tnfrsf11bO08712 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tnfrsf11bO08712 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Tnfrsf11bO08712 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tnfrsf11bO08712 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Tnfrsf11bO08712 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Tnfrsf11bO08712 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Tnfrsf11bO08712 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tnfrsf11bO08712 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tnfrsf11bO08712 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Tnfrsf11bO08712 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tnfrsf11bO08712 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tnfrsf11bO08712 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.67■■□□□ 1.54
Tnfrsf11bO08712 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tnfrsf11bO08712 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Tnfrsf11bO08712 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tnfrsf11bO08712 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Tnfrsf11bO08712 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.64■■□□□ 1.53
Tnfrsf11bO08712 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Tnfrsf11bO08712 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Tnfrsf11bO08712 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Tnfrsf11bO08712 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Tnfrsf11bO08712 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Tnfrsf11bO08712 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Tnfrsf11bO08712 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnfrsf11bO08712 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tnfrsf11bO08712 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Tnfrsf11bO08712 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Tnfrsf11bO08712 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tnfrsf11bO08712 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Tnfrsf11bO08712 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Tnfrsf11bO08712 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Tnfrsf11bO08712 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Tnfrsf11bO08712 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tnfrsf11bO08712 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Tnfrsf11bO08712 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.51■■□□□ 1.51
Tnfrsf11bO08712 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tnfrsf11bO08712 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tnfrsf11bO08712 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tnfrsf11bO08712 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tnfrsf11bO08712 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Tnfrsf11bO08712 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Tnfrsf11bO08712 Zfp131-205ENSMUST00000223812 663 ntBASIC24.49■■□□□ 1.51
Tnfrsf11bO08712 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.48■■□□□ 1.51
Tnfrsf11bO08712 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Tnfrsf11bO08712 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.47■■□□□ 1.51
Tnfrsf11bO08712 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Tnfrsf11bO08712 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.46■■□□□ 1.51
Tnfrsf11bO08712 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.45■■□□□ 1.5
Tnfrsf11bO08712 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Tnfrsf11bO08712 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.45■■□□□ 1.5
Tnfrsf11bO08712 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Tnfrsf11bO08712 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tnfrsf11bO08712 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tnfrsf11bO08712 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Tnfrsf11bO08712 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tnfrsf11bO08712 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnfrsf11bO08712 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnfrsf11bO08712 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Tnfrsf11bO08712 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.41■■□□□ 1.5
Tnfrsf11bO08712 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tnfrsf11bO08712 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Tnfrsf11bO08712 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Tnfrsf11bO08712 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.39■■□□□ 1.49
Tnfrsf11bO08712 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.39■■□□□ 1.49
Tnfrsf11bO08712 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.49
Tnfrsf11bO08712 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.38■■□□□ 1.49
Tnfrsf11bO08712 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Tnfrsf11bO08712 Gm9397-201ENSMUST00000200125 605 ntBASIC24.37■■□□□ 1.49
Tnfrsf11bO08712 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tnfrsf11bO08712 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Tnfrsf11bO08712 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Tnfrsf11bO08712 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.34■■□□□ 1.49
Tnfrsf11bO08712 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Tnfrsf11bO08712 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tnfrsf11bO08712 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Tnfrsf11bO08712 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Tnfrsf11bO08712 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.32■■□□□ 1.48
Tnfrsf11bO08712 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.32■■□□□ 1.48
Tnfrsf11bO08712 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms