Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnfrsf11bO08712 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Tnfrsf11bO08712 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Tnfrsf11bO08712 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tnfrsf11bO08712 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tnfrsf11bO08712 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tnfrsf11bO08712 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Tnfrsf11bO08712 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tnfrsf11bO08712 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Tnfrsf11bO08712 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Tnfrsf11bO08712 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Tnfrsf11bO08712 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tnfrsf11bO08712 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tnfrsf11bO08712 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Tnfrsf11bO08712 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tnfrsf11bO08712 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tnfrsf11bO08712 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.67■■□□□ 1.54
Tnfrsf11bO08712 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tnfrsf11bO08712 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Tnfrsf11bO08712 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tnfrsf11bO08712 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Tnfrsf11bO08712 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.64■■□□□ 1.53
Tnfrsf11bO08712 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Tnfrsf11bO08712 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Tnfrsf11bO08712 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Tnfrsf11bO08712 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Tnfrsf11bO08712 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Tnfrsf11bO08712 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Tnfrsf11bO08712 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnfrsf11bO08712 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tnfrsf11bO08712 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Tnfrsf11bO08712 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Tnfrsf11bO08712 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tnfrsf11bO08712 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Tnfrsf11bO08712 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Tnfrsf11bO08712 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Tnfrsf11bO08712 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Tnfrsf11bO08712 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Tnfrsf11bO08712 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tnfrsf11bO08712 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Tnfrsf11bO08712 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.51■■□□□ 1.51
Tnfrsf11bO08712 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tnfrsf11bO08712 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tnfrsf11bO08712 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tnfrsf11bO08712 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tnfrsf11bO08712 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Tnfrsf11bO08712 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Tnfrsf11bO08712 Zfp131-205ENSMUST00000223812 663 ntBASIC24.49■■□□□ 1.51
Tnfrsf11bO08712 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.48■■□□□ 1.51
Tnfrsf11bO08712 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Tnfrsf11bO08712 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.47■■□□□ 1.51
Tnfrsf11bO08712 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Tnfrsf11bO08712 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.46■■□□□ 1.51
Tnfrsf11bO08712 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.45■■□□□ 1.5
Tnfrsf11bO08712 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Tnfrsf11bO08712 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.45■■□□□ 1.5
Tnfrsf11bO08712 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Tnfrsf11bO08712 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tnfrsf11bO08712 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Tnfrsf11bO08712 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Tnfrsf11bO08712 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tnfrsf11bO08712 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnfrsf11bO08712 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tnfrsf11bO08712 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Tnfrsf11bO08712 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.41■■□□□ 1.5
Tnfrsf11bO08712 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tnfrsf11bO08712 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Tnfrsf11bO08712 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Tnfrsf11bO08712 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.39■■□□□ 1.49
Tnfrsf11bO08712 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.39■■□□□ 1.49
Tnfrsf11bO08712 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.49
Tnfrsf11bO08712 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.38■■□□□ 1.49
Tnfrsf11bO08712 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Tnfrsf11bO08712 Gm9397-201ENSMUST00000200125 605 ntBASIC24.37■■□□□ 1.49
Tnfrsf11bO08712 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Tnfrsf11bO08712 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Tnfrsf11bO08712 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Tnfrsf11bO08712 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Tnfrsf11bO08712 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.34■■□□□ 1.49
Tnfrsf11bO08712 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Tnfrsf11bO08712 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Tnfrsf11bO08712 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Tnfrsf11bO08712 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Tnfrsf11bO08712 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.32■■□□□ 1.48
Tnfrsf11bO08712 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.32■■□□□ 1.48
Tnfrsf11bO08712 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms