Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25,96■■□□□ 1,75
Ccdc188F6WEU2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25,95■■□□□ 1,75
Ccdc188F6WEU2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25,95■■□□□ 1,74
Ccdc188F6WEU2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,74
Ccdc188F6WEU2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25,94■■□□□ 1,74
Ccdc188F6WEU2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Ccdc188F6WEU2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25,93■■□□□ 1,74
Ccdc188F6WEU2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25,92■■□□□ 1,74
Ccdc188F6WEU2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Ccdc188F6WEU2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Ccdc188F6WEU2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Ccdc188F6WEU2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25,91■■□□□ 1,74
Ccdc188F6WEU2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25,9■■□□□ 1,74
Ccdc188F6WEU2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Ccdc188F6WEU2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25,89■■□□□ 1,74
Ccdc188F6WEU2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25,89■■□□□ 1,74
Ccdc188F6WEU2 Gm6345-201ENSMUST00000180378 1691 ntBASIC25,88■■□□□ 1,73
Ccdc188F6WEU2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25,88■■□□□ 1,73
Ccdc188F6WEU2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25,88■■□□□ 1,73
Ccdc188F6WEU2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Ccdc188F6WEU2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25,87■■□□□ 1,73
Ccdc188F6WEU2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25,86■■□□□ 1,73
Ccdc188F6WEU2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Ccdc188F6WEU2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25,86■■□□□ 1,73
Ccdc188F6WEU2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Ccdc188F6WEU2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Ccdc188F6WEU2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25,85■■□□□ 1,73
Ccdc188F6WEU2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25,84■■□□□ 1,73
Ccdc188F6WEU2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,72
Ccdc188F6WEU2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,72
Ccdc188F6WEU2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25,82■■□□□ 1,72
Ccdc188F6WEU2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Ccdc188F6WEU2 Scarna2-201ENSMUST00000157560 414 ntBASIC25,81■■□□□ 1,72
Ccdc188F6WEU2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25,81■■□□□ 1,72
Ccdc188F6WEU2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25,8■■□□□ 1,72
Ccdc188F6WEU2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Ccdc188F6WEU2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25,79■■□□□ 1,72
Ccdc188F6WEU2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25,79■■□□□ 1,72
Ccdc188F6WEU2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Ccdc188F6WEU2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Ccdc188F6WEU2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Ccdc188F6WEU2 Gm4799-201ENSMUST00000095396 657 ntBASIC25,78■■□□□ 1,72
Ccdc188F6WEU2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25,77■■□□□ 1,72
Ccdc188F6WEU2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Ccdc188F6WEU2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25,77■■□□□ 1,72
Ccdc188F6WEU2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25,76■■□□□ 1,71
Ccdc188F6WEU2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25,76■■□□□ 1,71
Ccdc188F6WEU2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Ccdc188F6WEU2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Ccdc188F6WEU2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25,75■■□□□ 1,71
Ccdc188F6WEU2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Ccdc188F6WEU2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25,74■■□□□ 1,71
Ccdc188F6WEU2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Ccdc188F6WEU2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Ccdc188F6WEU2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Ccdc188F6WEU2 Gm11687-201ENSMUST00000118911 886 ntBASIC25,71■■□□□ 1,71
Ccdc188F6WEU2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,71
Ccdc188F6WEU2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25,7■■□□□ 1,7
Ccdc188F6WEU2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25,69■■□□□ 1,7
Ccdc188F6WEU2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Ccdc188F6WEU2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Ccdc188F6WEU2 Gm7332-201ENSMUST00000118351 454 ntBASIC25,68■■□□□ 1,7
Ccdc188F6WEU2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25,66■■□□□ 1,7
Ccdc188F6WEU2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
Ccdc188F6WEU2 Gm9806-201ENSMUST00000051080 552 ntBASIC25,66■■□□□ 1,7
Ccdc188F6WEU2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25,65■■□□□ 1,7
Ccdc188F6WEU2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25,65■■□□□ 1,7
Ccdc188F6WEU2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25,65■■□□□ 1,7
Ccdc188F6WEU2 Gm27502-201ENSMUST00000183495 199 ntBASIC25,65■■□□□ 1,7
Ccdc188F6WEU2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25,65■■□□□ 1,7
Ccdc188F6WEU2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25,65■■□□□ 1,7
Ccdc188F6WEU2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Ccdc188F6WEU2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25,64■■□□□ 1,7
Ccdc188F6WEU2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Ccdc188F6WEU2 Gm16437-201ENSMUST00000025669 507 ntBASIC25,64■■□□□ 1,7
Ccdc188F6WEU2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Ccdc188F6WEU2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25,64■■□□□ 1,7
Ccdc188F6WEU2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25,63■■□□□ 1,69
Ccdc188F6WEU2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25,63■■□□□ 1,69
Ccdc188F6WEU2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Ccdc188F6WEU2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Ccdc188F6WEU2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Ccdc188F6WEU2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25,59■■□□□ 1,69
Ccdc188F6WEU2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Ccdc188F6WEU2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25,58■■□□□ 1,69
Ccdc188F6WEU2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Ccdc188F6WEU2 Gm5812-201ENSMUST00000061073 957 ntBASIC25,57■■□□□ 1,68
Ccdc188F6WEU2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Ccdc188F6WEU2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Ccdc188F6WEU2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25,56■■□□□ 1,68
Ccdc188F6WEU2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Ccdc188F6WEU2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Ccdc188F6WEU2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Ccdc188F6WEU2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25,53■■□□□ 1,68
Ccdc188F6WEU2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25,53■■□□□ 1,68
Ccdc188F6WEU2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Ccdc188F6WEU2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25,53■■□□□ 1,68
Ccdc188F6WEU2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25,52■■□□□ 1,68
Ccdc188F6WEU2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25,52■■□□□ 1,68
Ccdc188F6WEU2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Retrieved 100 of 76,532 protein–RNA pairs in 12,6 ms