Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Shank1D3YZU1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.16■■□□□ 1.14
Shank1D3YZU1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Shank1D3YZU1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Shank1D3YZU1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Shank1D3YZU1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Shank1D3YZU1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.13■■□□□ 1.13
Shank1D3YZU1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Shank1D3YZU1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Shank1D3YZU1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Shank1D3YZU1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Shank1D3YZU1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.11■■□□□ 1.13
Shank1D3YZU1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shank1D3YZU1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Shank1D3YZU1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.08■■□□□ 1.13
Shank1D3YZU1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Shank1D3YZU1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.06■■□□□ 1.12
Shank1D3YZU1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shank1D3YZU1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shank1D3YZU1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.06■■□□□ 1.12
Shank1D3YZU1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shank1D3YZU1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shank1D3YZU1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.05■■□□□ 1.12
Shank1D3YZU1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shank1D3YZU1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shank1D3YZU1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.04■■□□□ 1.12
Shank1D3YZU1 Gm6311-201ENSMUST00000073790 878 ntBASIC22.03■■□□□ 1.12
Shank1D3YZU1 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.03■■□□□ 1.12
Shank1D3YZU1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.02■■□□□ 1.12
Shank1D3YZU1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shank1D3YZU1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.02■■□□□ 1.12
Shank1D3YZU1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shank1D3YZU1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shank1D3YZU1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shank1D3YZU1 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.01■■□□□ 1.11
Shank1D3YZU1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shank1D3YZU1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22■■□□□ 1.11
Shank1D3YZU1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.99■■□□□ 1.11
Shank1D3YZU1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Shank1D3YZU1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shank1D3YZU1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.97■■□□□ 1.11
Shank1D3YZU1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Shank1D3YZU1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Shank1D3YZU1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Shank1D3YZU1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.94■■□□□ 1.1
Shank1D3YZU1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Shank1D3YZU1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.94■■□□□ 1.1
Shank1D3YZU1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.93■■□□□ 1.1
Shank1D3YZU1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Shank1D3YZU1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Shank1D3YZU1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Shank1D3YZU1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Shank1D3YZU1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.91■■□□□ 1.1
Shank1D3YZU1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.9■■□□□ 1.1
Shank1D3YZU1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Shank1D3YZU1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Shank1D3YZU1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Shank1D3YZU1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shank1D3YZU1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shank1D3YZU1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shank1D3YZU1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Shank1D3YZU1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shank1D3YZU1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Shank1D3YZU1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Shank1D3YZU1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Shank1D3YZU1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shank1D3YZU1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Shank1D3YZU1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shank1D3YZU1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shank1D3YZU1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shank1D3YZU1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shank1D3YZU1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Shank1D3YZU1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Shank1D3YZU1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shank1D3YZU1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shank1D3YZU1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Shank1D3YZU1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shank1D3YZU1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Shank1D3YZU1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shank1D3YZU1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shank1D3YZU1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Shank1D3YZU1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Shank1D3YZU1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shank1D3YZU1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.81■■□□□ 1.08
Shank1D3YZU1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shank1D3YZU1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Shank1D3YZU1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Shank1D3YZU1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Shank1D3YZU1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shank1D3YZU1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shank1D3YZU1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shank1D3YZU1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shank1D3YZU1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shank1D3YZU1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.77■■□□□ 1.07
Shank1D3YZU1 Gm12366-201ENSMUST00000121722 873 ntBASIC21.77■■□□□ 1.07
Shank1D3YZU1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.77■■□□□ 1.07
Shank1D3YZU1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.77■■□□□ 1.07
Shank1D3YZU1 Gm5786-201ENSMUST00000085368 882 ntBASIC21.77■■□□□ 1.07
Shank1D3YZU1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shank1D3YZU1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 186.7 ms