Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbb-bsA8DUK4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hbb-bsA8DUK4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Hbb-bsA8DUK4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hbb-bsA8DUK4 Mipep-204ENSMUST00000225043 1548 ntBASIC17.12■□□□□ 0.33
Hbb-bsA8DUK4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hbb-bsA8DUK4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hbb-bsA8DUK4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hbb-bsA8DUK4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hbb-bsA8DUK4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hbb-bsA8DUK4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hbb-bsA8DUK4 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.1■□□□□ 0.33
Hbb-bsA8DUK4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hbb-bsA8DUK4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.1■□□□□ 0.33
Hbb-bsA8DUK4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.1■□□□□ 0.33
Hbb-bsA8DUK4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hbb-bsA8DUK4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hbb-bsA8DUK4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hbb-bsA8DUK4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hbb-bsA8DUK4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hbb-bsA8DUK4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hbb-bsA8DUK4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hbb-bsA8DUK4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hbb-bsA8DUK4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hbb-bsA8DUK4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hbb-bsA8DUK4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hbb-bsA8DUK4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hbb-bsA8DUK4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hbb-bsA8DUK4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hbb-bsA8DUK4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hbb-bsA8DUK4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hbb-bsA8DUK4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hbb-bsA8DUK4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hbb-bsA8DUK4 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.05■□□□□ 0.32
Hbb-bsA8DUK4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hbb-bsA8DUK4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hbb-bsA8DUK4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hbb-bsA8DUK4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hbb-bsA8DUK4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hbb-bsA8DUK4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hbb-bsA8DUK4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hbb-bsA8DUK4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Hbb-bsA8DUK4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hbb-bsA8DUK4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hbb-bsA8DUK4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Hbb-bsA8DUK4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hbb-bsA8DUK4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hbb-bsA8DUK4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hbb-bsA8DUK4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hbb-bsA8DUK4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hbb-bsA8DUK4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hbb-bsA8DUK4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hbb-bsA8DUK4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hbb-bsA8DUK4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Hbb-bsA8DUK4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hbb-bsA8DUK4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.98■□□□□ 0.31
Hbb-bsA8DUK4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hbb-bsA8DUK4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Hbb-bsA8DUK4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Hbb-bsA8DUK4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hbb-bsA8DUK4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hbb-bsA8DUK4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hbb-bsA8DUK4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hbb-bsA8DUK4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hbb-bsA8DUK4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hbb-bsA8DUK4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hbb-bsA8DUK4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Hbb-bsA8DUK4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hbb-bsA8DUK4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hbb-bsA8DUK4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.95■□□□□ 0.3
Hbb-bsA8DUK4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hbb-bsA8DUK4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hbb-bsA8DUK4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hbb-bsA8DUK4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hbb-bsA8DUK4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.94■□□□□ 0.3
Hbb-bsA8DUK4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hbb-bsA8DUK4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hbb-bsA8DUK4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hbb-bsA8DUK4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Hbb-bsA8DUK4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hbb-bsA8DUK4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Hbb-bsA8DUK4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hbb-bsA8DUK4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Hbb-bsA8DUK4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hbb-bsA8DUK4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hbb-bsA8DUK4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hbb-bsA8DUK4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hbb-bsA8DUK4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hbb-bsA8DUK4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hbb-bsA8DUK4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hbb-bsA8DUK4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hbb-bsA8DUK4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hbb-bsA8DUK4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hbb-bsA8DUK4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.9■□□□□ 0.3
Hbb-bsA8DUK4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hbb-bsA8DUK4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hbb-bsA8DUK4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hbb-bsA8DUK4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hbb-bsA8DUK4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hbb-bsA8DUK4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms