Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Shroom2A2ALU4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
Shroom2A2ALU4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC40.7■■■■■ 4.11
Shroom2A2ALU4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
Shroom2A2ALU4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
Shroom2A2ALU4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC40.7■■■■■ 4.11
Shroom2A2ALU4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC40.7■■■■■ 4.11
Shroom2A2ALU4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
Shroom2A2ALU4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.11
Shroom2A2ALU4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
Shroom2A2ALU4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC40.69■■■■■ 4.1
Shroom2A2ALU4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC40.68■■■■■ 4.1
Shroom2A2ALU4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC40.66■■■■■ 4.1
Shroom2A2ALU4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
Shroom2A2ALU4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC40.65■■■■■ 4.1
Shroom2A2ALU4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC40.63■■■■■ 4.09
Shroom2A2ALU4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Shroom2A2ALU4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC40.58■■■■■ 4.09
Shroom2A2ALU4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
Shroom2A2ALU4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
Shroom2A2ALU4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC40.54■■■■■ 4.08
Shroom2A2ALU4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
Shroom2A2ALU4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC40.53■■■■■ 4.08
Shroom2A2ALU4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC40.53■■■■■ 4.08
Shroom2A2ALU4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
Shroom2A2ALU4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC40.52■■■■■ 4.08
Shroom2A2ALU4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC40.51■■■■■ 4.08
Shroom2A2ALU4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC40.51■■■■■ 4.07
Shroom2A2ALU4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC40.5■■■■■ 4.07
Shroom2A2ALU4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
Shroom2A2ALU4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC40.49■■■■■ 4.07
Shroom2A2ALU4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
Shroom2A2ALU4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC40.48■■■■■ 4.07
Shroom2A2ALU4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC40.47■■■■■ 4.07
Shroom2A2ALU4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
Shroom2A2ALU4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC40.45■■■■■ 4.07
Shroom2A2ALU4 Gm5812-201ENSMUST00000061073 957 ntBASIC40.45■■■■■ 4.07
Shroom2A2ALU4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
Shroom2A2ALU4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC40.43■■■■■ 4.06
Shroom2A2ALU4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC40.43■■■■■ 4.06
Shroom2A2ALU4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC40.42■■■■■ 4.06
Shroom2A2ALU4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC40.42■■■■■ 4.06
Shroom2A2ALU4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC40.41■■■■■ 4.06
Shroom2A2ALU4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC40.41■■■■■ 4.06
Shroom2A2ALU4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
Shroom2A2ALU4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC40.39■■■■■ 4.06
Shroom2A2ALU4 Gm6345-201ENSMUST00000180378 1691 ntBASIC40.39■■■■■ 4.06
Shroom2A2ALU4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
Shroom2A2ALU4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.05
Shroom2A2ALU4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC40.38■■■■■ 4.05
Shroom2A2ALU4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC40.38■■■■■ 4.05
Shroom2A2ALU4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
Shroom2A2ALU4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
Shroom2A2ALU4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC40.35■■■■■ 4.05
Shroom2A2ALU4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC40.35■■■■■ 4.05
Shroom2A2ALU4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC40.34■■■■■ 4.05
Shroom2A2ALU4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC40.34■■■■■ 4.05
Shroom2A2ALU4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC40.33■■■■■ 4.05
Shroom2A2ALU4 Gm4799-201ENSMUST00000095396 657 ntBASIC40.33■■■■■ 4.05
Shroom2A2ALU4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC40.32■■■■■ 4.05
Shroom2A2ALU4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC40.32■■■■■ 4.05
Shroom2A2ALU4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
Shroom2A2ALU4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
Shroom2A2ALU4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC40.3■■■■■ 4.04
Shroom2A2ALU4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
Shroom2A2ALU4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
Shroom2A2ALU4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC40.28■■■■■ 4.04
Shroom2A2ALU4 Scarna2-201ENSMUST00000157560 414 ntBASIC40.28■■■■■ 4.04
Shroom2A2ALU4 Gm11687-201ENSMUST00000118911 886 ntBASIC40.27■■■■■ 4.04
Shroom2A2ALU4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Shroom2A2ALU4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC40.27■■■■■ 4.04
Shroom2A2ALU4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC40.26■■■■■ 4.04
Shroom2A2ALU4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC40.26■■■■■ 4.04
Shroom2A2ALU4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
Shroom2A2ALU4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
Shroom2A2ALU4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Shroom2A2ALU4 Gm7332-201ENSMUST00000118351 454 ntBASIC40.23■■■■■ 4.03
Shroom2A2ALU4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Shroom2A2ALU4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC40.22■■■■■ 4.03
Shroom2A2ALU4 Gm9806-201ENSMUST00000051080 552 ntBASIC40.21■■■■■ 4.03
Shroom2A2ALU4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
Shroom2A2ALU4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
Shroom2A2ALU4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.03
Shroom2A2ALU4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC40.19■■■■■ 4.02
Shroom2A2ALU4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC40.19■■■■■ 4.02
Shroom2A2ALU4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
Shroom2A2ALU4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
Shroom2A2ALU4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
Shroom2A2ALU4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC40.14■■■■■ 4.02
Shroom2A2ALU4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.02
Shroom2A2ALU4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
Shroom2A2ALU4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
Shroom2A2ALU4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
Shroom2A2ALU4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC40.1■■■■■ 4.01
Shroom2A2ALU4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC40.1■■■■■ 4.01
Shroom2A2ALU4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC40.09■■■■■ 4.01
Shroom2A2ALU4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC40.09■■■■■ 4.01
Shroom2A2ALU4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC40.07■■■■■ 4
Shroom2A2ALU4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC40.07■■■■■ 4
Shroom2A2ALU4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC40.07■■■■■ 4
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms