Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav23A0A0G2JG17 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav23A0A0G2JG17 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav23A0A0G2JG17 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav23A0A0G2JG17 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav23A0A0G2JG17 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trav23A0A0G2JG17 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav23A0A0G2JG17 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav23A0A0G2JG17 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav23A0A0G2JG17 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav23A0A0G2JG17 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav23A0A0G2JG17 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav23A0A0G2JG17 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Trav23A0A0G2JG17 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav23A0A0G2JG17 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trav23A0A0G2JG17 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav23A0A0G2JG17 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav23A0A0G2JG17 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav23A0A0G2JG17 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav23A0A0G2JG17 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav23A0A0G2JG17 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.61■□□□□ 0.73
Trav23A0A0G2JG17 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav23A0A0G2JG17 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav23A0A0G2JG17 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav23A0A0G2JG17 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav23A0A0G2JG17 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.58■□□□□ 0.72
Trav23A0A0G2JG17 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav23A0A0G2JG17 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav23A0A0G2JG17 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav23A0A0G2JG17 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav23A0A0G2JG17 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav23A0A0G2JG17 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav23A0A0G2JG17 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav23A0A0G2JG17 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav23A0A0G2JG17 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav23A0A0G2JG17 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.52■□□□□ 0.71
Trav23A0A0G2JG17 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav23A0A0G2JG17 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Trav23A0A0G2JG17 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav23A0A0G2JG17 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav23A0A0G2JG17 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav23A0A0G2JG17 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav23A0A0G2JG17 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav23A0A0G2JG17 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav23A0A0G2JG17 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav23A0A0G2JG17 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav23A0A0G2JG17 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav23A0A0G2JG17 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.44■□□□□ 0.7
Trav23A0A0G2JG17 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.43■□□□□ 0.7
Trav23A0A0G2JG17 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trav23A0A0G2JG17 Gm6821-201ENSMUST00000107540 542 ntBASIC19.41■□□□□ 0.7
Trav23A0A0G2JG17 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trav23A0A0G2JG17 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav23A0A0G2JG17 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav23A0A0G2JG17 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav23A0A0G2JG17 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav23A0A0G2JG17 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav23A0A0G2JG17 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav23A0A0G2JG17 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav23A0A0G2JG17 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav23A0A0G2JG17 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav23A0A0G2JG17 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav23A0A0G2JG17 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav23A0A0G2JG17 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms