Protein–RNA interactions for Protein: A0A0A6YY60

Ighv8-5, Immunoglobulin heavy variable V8-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-5A0A0A6YY60 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv8-5A0A0A6YY60 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ighv8-5A0A0A6YY60 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ighv8-5A0A0A6YY60 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv8-5A0A0A6YY60 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv8-5A0A0A6YY60 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv8-5A0A0A6YY60 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv8-5A0A0A6YY60 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ighv8-5A0A0A6YY60 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv8-5A0A0A6YY60 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv8-5A0A0A6YY60 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv8-5A0A0A6YY60 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv8-5A0A0A6YY60 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv8-5A0A0A6YY60 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.31■□□□□ 0.36
Ighv8-5A0A0A6YY60 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
Ighv8-5A0A0A6YY60 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ighv8-5A0A0A6YY60 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv8-5A0A0A6YY60 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv8-5A0A0A6YY60 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.3■□□□□ 0.36
Ighv8-5A0A0A6YY60 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv8-5A0A0A6YY60 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv8-5A0A0A6YY60 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv8-5A0A0A6YY60 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv8-5A0A0A6YY60 Gm24970-201ENSMUST00000175582 82 ntBASIC17.28■□□□□ 0.36
Ighv8-5A0A0A6YY60 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv8-5A0A0A6YY60 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv8-5A0A0A6YY60 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv8-5A0A0A6YY60 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ighv8-5A0A0A6YY60 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv8-5A0A0A6YY60 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.27■□□□□ 0.36
Ighv8-5A0A0A6YY60 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv8-5A0A0A6YY60 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv8-5A0A0A6YY60 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv8-5A0A0A6YY60 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.26■□□□□ 0.35
Ighv8-5A0A0A6YY60 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv8-5A0A0A6YY60 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ighv8-5A0A0A6YY60 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.25■□□□□ 0.35
Ighv8-5A0A0A6YY60 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv8-5A0A0A6YY60 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv8-5A0A0A6YY60 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv8-5A0A0A6YY60 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv8-5A0A0A6YY60 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv8-5A0A0A6YY60 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv8-5A0A0A6YY60 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv8-5A0A0A6YY60 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv8-5A0A0A6YY60 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv8-5A0A0A6YY60 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ighv8-5A0A0A6YY60 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv8-5A0A0A6YY60 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv8-5A0A0A6YY60 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv8-5A0A0A6YY60 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.2■□□□□ 0.34
Ighv8-5A0A0A6YY60 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv8-5A0A0A6YY60 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-5A0A0A6YY60 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-5A0A0A6YY60 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-5A0A0A6YY60 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-5A0A0A6YY60 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-5A0A0A6YY60 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Ighv8-5A0A0A6YY60 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ighv8-5A0A0A6YY60 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv8-5A0A0A6YY60 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ighv8-5A0A0A6YY60 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.18■□□□□ 0.34
Ighv8-5A0A0A6YY60 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv8-5A0A0A6YY60 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv8-5A0A0A6YY60 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv8-5A0A0A6YY60 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv8-5A0A0A6YY60 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ighv8-5A0A0A6YY60 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv8-5A0A0A6YY60 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv8-5A0A0A6YY60 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv8-5A0A0A6YY60 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv8-5A0A0A6YY60 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv8-5A0A0A6YY60 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Ighv8-5A0A0A6YY60 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv8-5A0A0A6YY60 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.15■□□□□ 0.34
Ighv8-5A0A0A6YY60 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-5A0A0A6YY60 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-5A0A0A6YY60 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-5A0A0A6YY60 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-5A0A0A6YY60 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-5A0A0A6YY60 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ighv8-5A0A0A6YY60 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv8-5A0A0A6YY60 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv8-5A0A0A6YY60 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv8-5A0A0A6YY60 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.13■□□□□ 0.33
Ighv8-5A0A0A6YY60 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ighv8-5A0A0A6YY60 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv8-5A0A0A6YY60 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv8-5A0A0A6YY60 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv8-5A0A0A6YY60 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.12■□□□□ 0.33
Ighv8-5A0A0A6YY60 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv8-5A0A0A6YY60 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv8-5A0A0A6YY60 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.12■□□□□ 0.33
Ighv8-5A0A0A6YY60 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv8-5A0A0A6YY60 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.11■□□□□ 0.33
Ighv8-5A0A0A6YY60 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv8-5A0A0A6YY60 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ighv8-5A0A0A6YY60 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv8-5A0A0A6YY60 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ighv8-5A0A0A6YY60 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms