Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-49A0A0A6YWX2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-49A0A0A6YWX2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-49A0A0A6YWX2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-49A0A0A6YWX2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-49A0A0A6YWX2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.14■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.12■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-49A0A0A6YWX2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.08■□□□□ 0.33
Ighv1-49A0A0A6YWX2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.07■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-49A0A0A6YWX2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.06■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-49A0A0A6YWX2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.05■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-49A0A0A6YWX2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.02■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.02■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-49A0A0A6YWX2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-49A0A0A6YWX2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.02■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.01■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-49A0A0A6YWX2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-49A0A0A6YWX2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-49A0A0A6YWX2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ighv1-49A0A0A6YWX2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-49A0A0A6YWX2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms