Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav13-4-dv7A0A075B6C2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.57■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13-4-dv7A0A075B6C2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.52■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13-4-dv7A0A075B6C2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.39■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav13-4-dv7A0A075B6C2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.36■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms