Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav18A0A075B656 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.86■□□□□ 0.77
Trav18A0A075B656 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trav18A0A075B656 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav18A0A075B656 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav18A0A075B656 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav18A0A075B656 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav18A0A075B656 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav18A0A075B656 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav18A0A075B656 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav18A0A075B656 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav18A0A075B656 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav18A0A075B656 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav18A0A075B656 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav18A0A075B656 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav18A0A075B656 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav18A0A075B656 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav18A0A075B656 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Trav18A0A075B656 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav18A0A075B656 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav18A0A075B656 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav18A0A075B656 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav18A0A075B656 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav18A0A075B656 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Trav18A0A075B656 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav18A0A075B656 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav18A0A075B656 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav18A0A075B656 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trav18A0A075B656 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav18A0A075B656 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav18A0A075B656 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trav18A0A075B656 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav18A0A075B656 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.74■□□□□ 0.75
Trav18A0A075B656 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav18A0A075B656 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav18A0A075B656 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav18A0A075B656 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav18A0A075B656 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav18A0A075B656 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.73■□□□□ 0.75
Trav18A0A075B656 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.73■□□□□ 0.75
Trav18A0A075B656 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav18A0A075B656 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav18A0A075B656 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.72■□□□□ 0.75
Trav18A0A075B656 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav18A0A075B656 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trav18A0A075B656 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav18A0A075B656 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav18A0A075B656 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav18A0A075B656 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav18A0A075B656 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav18A0A075B656 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trav18A0A075B656 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.69■□□□□ 0.74
Trav18A0A075B656 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav18A0A075B656 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav18A0A075B656 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.68■□□□□ 0.74
Trav18A0A075B656 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav18A0A075B656 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav18A0A075B656 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trav18A0A075B656 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav18A0A075B656 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trav18A0A075B656 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav18A0A075B656 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav18A0A075B656 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav18A0A075B656 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav18A0A075B656 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav18A0A075B656 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trav18A0A075B656 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav18A0A075B656 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav18A0A075B656 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav18A0A075B656 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav18A0A075B656 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav18A0A075B656 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav18A0A075B656 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav18A0A075B656 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav18A0A075B656 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav18A0A075B656 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav18A0A075B656 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trav18A0A075B656 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav18A0A075B656 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav18A0A075B656 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav18A0A075B656 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav18A0A075B656 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav18A0A075B656 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trav18A0A075B656 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav18A0A075B656 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav18A0A075B656 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav18A0A075B656 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav18A0A075B656 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav18A0A075B656 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.58■□□□□ 0.72
Trav18A0A075B656 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trav18A0A075B656 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Trav18A0A075B656 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav18A0A075B656 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav18A0A075B656 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav18A0A075B656 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav18A0A075B656 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trav18A0A075B656 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav18A0A075B656 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Trav18A0A075B656 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav18A0A075B656 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms