Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20,12■□□□□ 0,81
Trav5-4A0A075B652 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20,12■□□□□ 0,81
Trav5-4A0A075B652 Fezf2-202ENSMUST00000224023 1917 ntBASIC20,12■□□□□ 0,81
Trav5-4A0A075B652 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20,11■□□□□ 0,81
Trav5-4A0A075B652 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20,11■□□□□ 0,81
Trav5-4A0A075B652 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20,11■□□□□ 0,81
Trav5-4A0A075B652 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20,11■□□□□ 0,81
Trav5-4A0A075B652 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20,11■□□□□ 0,81
Trav5-4A0A075B652 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20,1■□□□□ 0,81
Trav5-4A0A075B652 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20,1■□□□□ 0,81
Trav5-4A0A075B652 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20,1■□□□□ 0,81
Trav5-4A0A075B652 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20,09■□□□□ 0,81
Trav5-4A0A075B652 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20,08■□□□□ 0,8
Trav5-4A0A075B652 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20,07■□□□□ 0,8
Trav5-4A0A075B652 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20,07■□□□□ 0,8
Trav5-4A0A075B652 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20,07■□□□□ 0,8
Trav5-4A0A075B652 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20,06■□□□□ 0,8
Trav5-4A0A075B652 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20,06■□□□□ 0,8
Trav5-4A0A075B652 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20,05■□□□□ 0,8
Trav5-4A0A075B652 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20,05■□□□□ 0,8
Trav5-4A0A075B652 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20,04■□□□□ 0,8
Trav5-4A0A075B652 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20,04■□□□□ 0,8
Trav5-4A0A075B652 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20,04■□□□□ 0,8
Trav5-4A0A075B652 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20,04■□□□□ 0,8
Trav5-4A0A075B652 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20,03■□□□□ 0,8
Trav5-4A0A075B652 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20,03■□□□□ 0,8
Trav5-4A0A075B652 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20,02■□□□□ 0,8
Trav5-4A0A075B652 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20,02■□□□□ 0,8
Trav5-4A0A075B652 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20,02■□□□□ 0,79
Trav5-4A0A075B652 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20,01■□□□□ 0,79
Trav5-4A0A075B652 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20,01■□□□□ 0,79
Trav5-4A0A075B652 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0,79
Trav5-4A0A075B652 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0,79
Trav5-4A0A075B652 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Trav5-4A0A075B652 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19,98■□□□□ 0,79
Trav5-4A0A075B652 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19,98■□□□□ 0,79
Trav5-4A0A075B652 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19,98■□□□□ 0,79
Trav5-4A0A075B652 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Trav5-4A0A075B652 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19,97■□□□□ 0,79
Trav5-4A0A075B652 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19,97■□□□□ 0,79
Trav5-4A0A075B652 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19,97■□□□□ 0,79
Trav5-4A0A075B652 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19,96■□□□□ 0,79
Trav5-4A0A075B652 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19,96■□□□□ 0,79
Trav5-4A0A075B652 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19,96■□□□□ 0,79
Trav5-4A0A075B652 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19,95■□□□□ 0,78
Trav5-4A0A075B652 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19,95■□□□□ 0,78
Trav5-4A0A075B652 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19,95■□□□□ 0,78
Trav5-4A0A075B652 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19,94■□□□□ 0,78
Trav5-4A0A075B652 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19,94■□□□□ 0,78
Trav5-4A0A075B652 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19,93■□□□□ 0,78
Trav5-4A0A075B652 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19,93■□□□□ 0,78
Trav5-4A0A075B652 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19,93■□□□□ 0,78
Trav5-4A0A075B652 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19,92■□□□□ 0,78
Trav5-4A0A075B652 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19,92■□□□□ 0,78
Trav5-4A0A075B652 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19,92■□□□□ 0,78
Trav5-4A0A075B652 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19,91■□□□□ 0,78
Trav5-4A0A075B652 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19,91■□□□□ 0,78
Trav5-4A0A075B652 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19,91■□□□□ 0,78
Trav5-4A0A075B652 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19,91■□□□□ 0,78
Trav5-4A0A075B652 Zfp131-205ENSMUST00000223812 663 ntBASIC19,9■□□□□ 0,78
Trav5-4A0A075B652 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19,89■□□□□ 0,77
Trav5-4A0A075B652 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19,89■□□□□ 0,77
Trav5-4A0A075B652 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19,88■□□□□ 0,77
Trav5-4A0A075B652 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19,88■□□□□ 0,77
Trav5-4A0A075B652 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19,87■□□□□ 0,77
Trav5-4A0A075B652 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19,87■□□□□ 0,77
Trav5-4A0A075B652 Gm43863-201ENSMUST00000203822 1192 ntBASIC19,87■□□□□ 0,77
Trav5-4A0A075B652 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19,87■□□□□ 0,77
Trav5-4A0A075B652 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19,86■□□□□ 0,77
Trav5-4A0A075B652 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19,86■□□□□ 0,77
Trav5-4A0A075B652 Pcf11-205ENSMUST00000208255 1720 ntBASIC19,85■□□□□ 0,77
Trav5-4A0A075B652 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19,85■□□□□ 0,77
Trav5-4A0A075B652 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19,85■□□□□ 0,77
Trav5-4A0A075B652 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19,85■□□□□ 0,77
Trav5-4A0A075B652 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19,84■□□□□ 0,77
Trav5-4A0A075B652 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19,84■□□□□ 0,77
Trav5-4A0A075B652 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19,84■□□□□ 0,77
Trav5-4A0A075B652 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19,84■□□□□ 0,77
Trav5-4A0A075B652 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19,83■□□□□ 0,77
Trav5-4A0A075B652 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19,83■□□□□ 0,76
Trav5-4A0A075B652 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19,83■□□□□ 0,76
Trav5-4A0A075B652 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Trav5-4A0A075B652 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Trav5-4A0A075B652 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19,82■□□□□ 0,76
Trav5-4A0A075B652 Tdp2-203ENSMUST00000223804 1136 ntBASIC19,82■□□□□ 0,76
Trav5-4A0A075B652 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19,81■□□□□ 0,76
Trav5-4A0A075B652 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19,81■□□□□ 0,76
Trav5-4A0A075B652 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19,81■□□□□ 0,76
Trav5-4A0A075B652 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19,81■□□□□ 0,76
Trav5-4A0A075B652 Gm9397-201ENSMUST00000200125 605 ntBASIC19,8■□□□□ 0,76
Trav5-4A0A075B652 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19,79■□□□□ 0,76
Trav5-4A0A075B652 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19,79■□□□□ 0,76
Trav5-4A0A075B652 AC157572.2-201ENSMUST00000226970 908 ntBASIC19,79■□□□□ 0,76
Trav5-4A0A075B652 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19,79■□□□□ 0,76
Trav5-4A0A075B652 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19,78■□□□□ 0,76
Trav5-4A0A075B652 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19,78■□□□□ 0,76
Trav5-4A0A075B652 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19,78■□□□□ 0,76
Trav5-4A0A075B652 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19,78■□□□□ 0,76
Trav5-4A0A075B652 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19,76■□□□□ 0,75
Trav5-4A0A075B652 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19,76■□□□□ 0,75
Retrieved 100 of 76,532 protein–RNA pairs in 20,3 ms