Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm44102-201ENSMUST00000204031 1666 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm37356-201ENSMUST00000193362 1613 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm16205-201ENSMUST00000117720 1027 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm11385-201ENSMUST00000121513 570 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm22276-201ENSMUST00000122469 129 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm24767-201ENSMUST00000158509 95 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm2855-201ENSMUST00000166765 456 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm27679-201ENSMUST00000184612 84 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm18728-201ENSMUST00000186155 753 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm8861-201ENSMUST00000196346 832 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm29817-201ENSMUST00000210098 172 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 AC123665.4-201ENSMUST00000228790 249 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm22977-201ENSMUST00000082615 107 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 n-R5s173-201ENSMUST00000082620 119 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC7.54□□□□□ -1.2
RtcbQ99LF4 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RtcbQ99LF4 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm19368-201ENSMUST00000221258 4424 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm37181-201ENSMUST00000192513 1727 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm14512-201ENSMUST00000117924 230 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm3835-201ENSMUST00000120752 403 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm13007-201ENSMUST00000121866 365 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm15096-201ENSMUST00000121918 878 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm17142-201ENSMUST00000164933 645 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm22420-201ENSMUST00000178795 126 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm28017-201ENSMUST00000183434 126 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm28188-201ENSMUST00000190483 236 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm18444-201ENSMUST00000191239 629 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm44494-201ENSMUST00000196760 129 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm8039-201ENSMUST00000204758 712 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm17992-201ENSMUST00000207346 1072 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 AC151971.3-201ENSMUST00000214694 404 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm18228-201ENSMUST00000217297 1091 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 CT030166.1-201ENSMUST00000222654 357 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm24623-201ENSMUST00000082616 194 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 n-R5s46-201ENSMUST00000083960 116 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm6125-201ENSMUST00000217983 3472 ntBASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RtcbQ99LF4 Gm8750-201ENSMUST00000173278 1537 ntBASIC7.52□□□□□ -1.2
RtcbQ99LF4 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms