Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm37710-201ENSMUST00000193501 1274 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC7.97□□□□□ -1.13
Cux1P53564 CR974592.1-201ENSMUST00000220422 574 ntBASIC7.97□□□□□ -1.13
Cux1P53564 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Cux1P53564 Gm37400-201ENSMUST00000193148 3605 ntBASIC7.97□□□□□ -1.13
Cux1P53564 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Cux1P53564 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Cux1P53564 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Cux1P53564 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Cux1P53564 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.13
Cux1P53564 Gm42559-201ENSMUST00000201811 3532 ntBASIC7.96□□□□□ -1.13
Cux1P53564 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Cux1P53564 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Cux1P53564 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.96□□□□□ -1.14
Cux1P53564 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Cux1P53564 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Cux1P53564 Gm12073-201ENSMUST00000117382 524 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Gm24363-201ENSMUST00000158440 311 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC7.96□□□□□ -1.14
Cux1P53564 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Cux1P53564 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Cux1P53564 Gm21856-201ENSMUST00000187547 696 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Gm23925-202ENSMUST00000188429 132 ntBASIC7.96□□□□□ -1.14
Cux1P53564 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC7.96□□□□□ -1.14
Cux1P53564 Gm21735-201ENSMUST00000190360 696 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Gm10048-201ENSMUST00000194196 372 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Gm2622-201ENSMUST00000200018 471 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Cux1P53564 Gm44757-201ENSMUST00000206373 157 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Cux1P53564 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC7.96□□□□□ -1.14
Cux1P53564 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Cux1P53564 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Cux1P53564 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Cux1P53564 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Cux1P53564 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.96□□□□□ -1.14
Cux1P53564 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Cux1P53564 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC7.96□□□□□ -1.14
Cux1P53564 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Cux1P53564 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Cux1P53564 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Cux1P53564 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Cux1P53564 Gm16082-201ENSMUST00000115992 377 ntBASIC7.95□□□□□ -1.14
Cux1P53564 Gm8145-201ENSMUST00000118220 745 ntBASIC7.95□□□□□ -1.14
Cux1P53564 Gm12110-201ENSMUST00000121601 579 ntBASIC7.95□□□□□ -1.14
Cux1P53564 Gm13745-201ENSMUST00000121994 527 ntBASIC7.95□□□□□ -1.14
Cux1P53564 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Gm26350-201ENSMUST00000157531 288 ntBASIC7.95□□□□□ -1.14
Cux1P53564 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC7.95□□□□□ -1.14
Cux1P53564 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Cux1P53564 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC7.95□□□□□ -1.14
Cux1P53564 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC7.95□□□□□ -1.14
Cux1P53564 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC7.95□□□□□ -1.14
Cux1P53564 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC7.95□□□□□ -1.14
Cux1P53564 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC7.95□□□□□ -1.14
Cux1P53564 Gm19786-201ENSMUST00000222589 580 ntBASIC7.95□□□□□ -1.14
Cux1P53564 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Cux1P53564 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC7.95□□□□□ -1.14
Cux1P53564 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC7.95□□□□□ -1.14
Cux1P53564 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Cux1P53564 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC7.95□□□□□ -1.14
Cux1P53564 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Cux1P53564 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Cux1P53564 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Cux1P53564 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Cux1P53564 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cux1P53564 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cux1P53564 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Gm9577-201ENSMUST00000174655 2620 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Cux1P53564 Gm11486-201ENSMUST00000107322 478 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Gm14756-201ENSMUST00000116395 240 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Gm14086-201ENSMUST00000117152 173 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cux1P53564 Gm15905-201ENSMUST00000137042 298 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cux1P53564 Gm23354-201ENSMUST00000158426 104 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC7.94□□□□□ -1.14
Cux1P53564 Gm8993-201ENSMUST00000182182 983 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cux1P53564 Gm9134-201ENSMUST00000193186 551 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Gm19739-201ENSMUST00000195941 153 ntBASIC7.94□□□□□ -1.14
Cux1P53564 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC7.94□□□□□ -1.14
Cux1P53564 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Cux1P53564 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms