Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.07□□□□□ -1.44
Smc1aQ9CU62 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm16394-201ENSMUST00000117289 675 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm15421-202ENSMUST00000118224 399 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm16179-201ENSMUST00000120685 373 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm12110-201ENSMUST00000121601 579 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm23964-201ENSMUST00000157966 107 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm29596-201ENSMUST00000185710 385 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm38360-201ENSMUST00000195130 454 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm6543-201ENSMUST00000197353 808 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm43974-201ENSMUST00000205080 684 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm44277-201ENSMUST00000205128 649 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm45870-201ENSMUST00000211269 601 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm18587-201ENSMUST00000213736 841 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Smc1aQ9CU62 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm9429-201ENSMUST00000117804 868 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm13259-201ENSMUST00000120792 456 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Mir6417-201ENSMUST00000183815 116 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm28429-201ENSMUST00000188521 363 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm42437-201ENSMUST00000197263 923 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm9332-201ENSMUST00000198431 730 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm6049-201ENSMUST00000222369 458 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 AV026068-237ENSMUST00000226075 572 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Clec2j-201ENSMUST00000032517 515 ntBASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Smc1aQ9CU62 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms