Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm16456-201ENSMUST00000174431 920 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm9317-201ENSMUST00000197055 862 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm9512-201ENSMUST00000223112 497 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 AC133910.1-201ENSMUST00000228128 624 ntBASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Nup98Q6PFD9 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm13506-201ENSMUST00000120391 1083 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm12317-201ENSMUST00000122307 319 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm6719-201ENSMUST00000202067 335 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm19936-201ENSMUST00000216414 838 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm5045-201ENSMUST00000027054 810 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 n-R5s170-201ENSMUST00000083726 113 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup98Q6PFD9 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Gm23837-201ENSMUST00000122656 286 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Gm8480-201ENSMUST00000190350 698 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Gm43136-201ENSMUST00000200403 636 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Gm45610-201ENSMUST00000209227 784 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nup98Q6PFD9 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Gm23879-201ENSMUST00000116874 126 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Gm14711-201ENSMUST00000117056 217 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Mir6416-201ENSMUST00000183664 117 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 AC112142.1-206ENSMUST00000228136 982 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Smc5-206ENSMUST00000226111 3265 ntBASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC6.08□□□□□ -1.44
Nup98Q6PFD9 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms