Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Gm22895-201ENSMUST00000157508 308 ntBASIC4.81□□□□□ -1.64
P06344 Mir1963-201ENSMUST00000158594 59 ntBASIC4.81□□□□□ -1.64
P06344 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P06344 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P06344 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.81□□□□□ -1.64
P06344 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
P06344 Gm18342-201ENSMUST00000186987 694 ntBASIC4.81□□□□□ -1.64
P06344 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P06344 Gm2427-201ENSMUST00000189121 881 ntBASIC4.81□□□□□ -1.64
P06344 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.81□□□□□ -1.64
P06344 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.81□□□□□ -1.64
P06344 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.81□□□□□ -1.64
P06344 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.81□□□□□ -1.64
P06344 Gm43444-201ENSMUST00000198123 291 ntBASIC4.81□□□□□ -1.64
P06344 Gm43629-201ENSMUST00000201782 704 ntBASIC4.81□□□□□ -1.64
P06344 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.81□□□□□ -1.64
P06344 Gm43895-201ENSMUST00000203219 855 ntBASIC4.81□□□□□ -1.64
P06344 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.81□□□□□ -1.64
P06344 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.81□□□□□ -1.64
P06344 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.81□□□□□ -1.64
P06344 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.81□□□□□ -1.64
P06344 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.81□□□□□ -1.64
P06344 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.81□□□□□ -1.64
P06344 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.81□□□□□ -1.64
P06344 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.81□□□□□ -1.64
P06344 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P06344 Gm23511-201ENSMUST00000083084 164 ntBASIC4.81□□□□□ -1.64
P06344 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
P06344 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.81□□□□□ -1.64
P06344 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
P06344 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
P06344 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
P06344 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
P06344 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
P06344 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Gm25595-201ENSMUST00000102273 97 ntBASIC4.8□□□□□ -1.64
P06344 Gm12677-201ENSMUST00000118668 426 ntBASIC4.8□□□□□ -1.64
P06344 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.8□□□□□ -1.64
P06344 Gm11804-201ENSMUST00000121663 468 ntBASIC4.8□□□□□ -1.64
P06344 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.8□□□□□ -1.64
P06344 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.8□□□□□ -1.64
P06344 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.8□□□□□ -1.64
P06344 Gm25846-201ENSMUST00000158013 135 ntBASIC4.8□□□□□ -1.64
P06344 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Gm17223-201ENSMUST00000171413 481 ntBASIC4.8□□□□□ -1.64
P06344 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.8□□□□□ -1.64
P06344 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
P06344 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.8□□□□□ -1.64
P06344 Gm2914-201ENSMUST00000186120 328 ntBASIC4.8□□□□□ -1.64
P06344 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.8□□□□□ -1.64
P06344 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.8□□□□□ -1.64
P06344 Gm7688-201ENSMUST00000212857 337 ntBASIC4.8□□□□□ -1.64
P06344 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.8□□□□□ -1.64
P06344 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.8□□□□□ -1.64
P06344 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.8□□□□□ -1.64
P06344 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.8□□□□□ -1.64
P06344 Gm6474-201ENSMUST00000223250 699 ntBASIC4.8□□□□□ -1.64
P06344 AV026068-231ENSMUST00000225862 482 ntBASIC4.8□□□□□ -1.64
P06344 CT030238.4-203ENSMUST00000227343 836 ntBASIC4.8□□□□□ -1.64
P06344 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.8□□□□□ -1.64
P06344 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
P06344 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
P06344 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.8□□□□□ -1.64
P06344 Mir337-201ENSMUST00000083592 97 ntBASIC4.8□□□□□ -1.64
P06344 Mir449a-201ENSMUST00000083641 91 ntBASIC4.8□□□□□ -1.64
P06344 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
P06344 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
P06344 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
P06344 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
P06344 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
P06344 Gm14912-201ENSMUST00000120166 1773 ntBASIC4.8□□□□□ -1.64
P06344 Gm18066-201ENSMUST00000210904 1774 ntBASIC4.8□□□□□ -1.64
P06344 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
P06344 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
P06344 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.8□□□□□ -1.64
P06344 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.8□□□□□ -1.64
P06344 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
P06344 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
P06344 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.79□□□□□ -1.64
P06344 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms