Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 AC153943.1-201ENSMUST00000219312 256 ntBASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Gm23796-201ENSMUST00000084011 160 ntBASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Gm20789-201ENSMUST00000221002 4195 ntBASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a6Q8C6K9 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm45084-201ENSMUST00000207096 1957 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm12094-201ENSMUST00000121781 472 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm26098-201ENSMUST00000157247 288 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm24186-201ENSMUST00000157983 127 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm16114-201ENSMUST00000161930 300 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm44603-201ENSMUST00000206820 367 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm12850-201ENSMUST00000119210 436 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm26362-201ENSMUST00000158865 315 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm6047-201ENSMUST00000167221 574 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm21816-201ENSMUST00000179255 360 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm6070-201ENSMUST00000207275 419 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Gm44984-201ENSMUST00000207802 394 ntBASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col6a6Q8C6K9 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm43360-201ENSMUST00000197656 2887 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm23608-201ENSMUST00000104545 128 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm12190-201ENSMUST00000120001 187 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm15791-201ENSMUST00000120365 319 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm8221-201ENSMUST00000178052 564 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Gm10723-201ENSMUST00000195366 6918 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 AC163731.1-201ENSMUST00000225696 3118 ntBASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col6a6Q8C6K9 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm23501-201ENSMUST00000157744 256 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm20519-201ENSMUST00000173684 359 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Gm2623-201ENSMUST00000199229 286 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Col6a6Q8C6K9 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms