Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm26170-201ENSMUST00000158419 148 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm44370-201ENSMUST00000175436 112 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm5946-201ENSMUST00000182340 970 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Mir6400-201ENSMUST00000184870 92 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm28976-201ENSMUST00000188070 144 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm37631-201ENSMUST00000192275 364 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm2367-201ENSMUST00000192374 472 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm6850-201ENSMUST00000210031 530 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm45690-201ENSMUST00000210775 246 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm7688-201ENSMUST00000212857 337 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 AC153961.1-201ENSMUST00000217760 385 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 AC164618.1-201ENSMUST00000225769 592 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Mir30b-201ENSMUST00000083542 96 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 AC124579.1-201ENSMUST00000223468 2520 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.72□□□□□ -1.65
Nkx3-1P97436 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Nkx3-1P97436 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Nkx3-1P97436 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.71□□□□□ -1.65
Nkx3-1P97436 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm23546-201ENSMUST00000158211 137 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm17086-201ENSMUST00000171346 484 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm26731-201ENSMUST00000180683 543 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm2950-201ENSMUST00000185530 520 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm19124-201ENSMUST00000191041 832 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm18553-201ENSMUST00000194152 634 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm37882-201ENSMUST00000195254 196 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm4963-201ENSMUST00000072718 378 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm23511-201ENSMUST00000083084 164 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nkx3-1P97436 Gm8853-201ENSMUST00000198366 1344 ntBASIC4.71□□□□□ -1.66
Nkx3-1P97436 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nkx3-1P97436 AC132852.2-201ENSMUST00000216052 2794 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx3-1P97436 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.7□□□□□ -1.66
Nkx3-1P97436 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC4.7□□□□□ -1.66
Nkx3-1P97436 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms