Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm37196-201ENSMUST00000194762 906 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 AC132104.1-201ENSMUST00000213615 260 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm23623-201ENSMUST00000082461 107 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Gm43009-201ENSMUST00000199979 3566 ntBASIC6.62□□□□□ -1.35
Ccdc9Q8VC31 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 AC162938.2-205ENSMUST00000217551 2828 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Pramel-201ENSMUST00000118979 1383 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm13484-201ENSMUST00000120738 412 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm15166-201ENSMUST00000120790 385 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm7212-201ENSMUST00000120817 348 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm2986-201ENSMUST00000121603 382 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Snora47-201ENSMUST00000157483 138 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm37576-201ENSMUST00000194228 372 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm7626-201ENSMUST00000195801 353 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm17834-201ENSMUST00000204322 891 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm45701-201ENSMUST00000212049 235 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm8412-201ENSMUST00000077493 440 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm45223-201ENSMUST00000207037 5138 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc9Q8VC31 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm23746-201ENSMUST00000104229 125 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm12653-201ENSMUST00000117778 561 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm11472-201ENSMUST00000121305 556 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm12732-201ENSMUST00000121688 180 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm23673-201ENSMUST00000157474 298 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm37774-201ENSMUST00000194401 245 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm18689-201ENSMUST00000203969 902 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm18805-201ENSMUST00000206872 655 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm7570-201ENSMUST00000215246 698 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm18620-201ENSMUST00000222295 324 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Gm2614-201ENSMUST00000223227 403 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.6□□□□□ -1.35
Ccdc9Q8VC31 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms