Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Cux1P53564 Gm14324-201ENSMUST00000121358 3051 ntBASIC8.21□□□□□ -1.1
Cux1P53564 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Cux1P53564 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Cux1P53564 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Cux1P53564 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Cux1P53564 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Cux1P53564 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Cux1P53564 Gm23294-201ENSMUST00000104150 164 ntBASIC8.2□□□□□ -1.1
Cux1P53564 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cux1P53564 Gm13367-201ENSMUST00000119955 796 ntBASIC8.2□□□□□ -1.1
Cux1P53564 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC8.2□□□□□ -1.1
Cux1P53564 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Cux1P53564 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Cux1P53564 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Cux1P53564 AC174780.1-201ENSMUST00000199415 1107 ntBASIC8.2□□□□□ -1.1
Cux1P53564 CT030195.1-201ENSMUST00000223887 378 ntBASIC8.2□□□□□ -1.1
Cux1P53564 Gm43333-201ENSMUST00000198340 2262 ntBASIC8.2□□□□□ -1.1
Cux1P53564 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cux1P53564 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Cux1P53564 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Cux1P53564 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC8.2□□□□□ -1.1
Cux1P53564 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cux1P53564 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cux1P53564 Gm42998-201ENSMUST00000197053 2371 ntBASIC8.2□□□□□ -1.1
Cux1P53564 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Cux1P53564 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Cux1P53564 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC8.19□□□□□ -1.1
Cux1P53564 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Cux1P53564 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Cux1P53564 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC8.19□□□□□ -1.1
Cux1P53564 Gm36986-201ENSMUST00000195320 353 ntBASIC8.19□□□□□ -1.1
Cux1P53564 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC8.19□□□□□ -1.1
Cux1P53564 Mir20a-201ENSMUST00000083508 107 ntBASIC8.19□□□□□ -1.1
Cux1P53564 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Cux1P53564 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC8.19□□□□□ -1.1
Cux1P53564 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC8.19□□□□□ -1.1
Cux1P53564 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Cux1P53564 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Cux1P53564 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
Cux1P53564 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Cux1P53564 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
Cux1P53564 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Cux1P53564 Gm44843-201ENSMUST00000208320 1396 ntBASIC8.19□□□□□ -1.1
Cux1P53564 Gm15120-201ENSMUST00000120602 301 ntBASIC8.19□□□□□ -1.1
Cux1P53564 Gm17014-201ENSMUST00000120765 168 ntBASIC8.19□□□□□ -1.1
Cux1P53564 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Cux1P53564 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC8.19□□□□□ -1.1
Cux1P53564 Ear-ps9-201ENSMUST00000161963 460 ntBASIC8.19□□□□□ -1.1
Cux1P53564 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC8.19□□□□□ -1.1
Cux1P53564 Ap3m1-208ENSMUST00000224016 764 ntBASIC8.19□□□□□ -1.1
Cux1P53564 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
Cux1P53564 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Cux1P53564 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Cux1P53564 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Cux1P53564 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC8.18□□□□□ -1.1
Cux1P53564 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Cux1P53564 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Cux1P53564 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Gm44248-201ENSMUST00000203079 1549 ntBASIC8.18□□□□□ -1.1
Cux1P53564 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Cux1P53564 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Cux1P53564 Gm15388-201ENSMUST00000121578 726 ntBASIC8.18□□□□□ -1.1
Cux1P53564 Gm14212-201ENSMUST00000122023 826 ntBASIC8.18□□□□□ -1.1
Cux1P53564 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Cux1P53564 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Cux1P53564 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC8.18□□□□□ -1.1
Cux1P53564 Gm46369-201ENSMUST00000221577 401 ntBASIC8.18□□□□□ -1.1
Cux1P53564 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC8.18□□□□□ -1.1
Cux1P53564 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 Gm29084-201ENSMUST00000185587 1452 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm43314-201ENSMUST00000196744 2231 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm42994-201ENSMUST00000195964 2549 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm19552-201ENSMUST00000194744 2833 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm44584-201ENSMUST00000208395 2880 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 Gm37217-201ENSMUST00000194017 3521 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 Mir92b-201ENSMUST00000102300 83 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cux1P53564 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC8.17□□□□□ -1.1
Cux1P53564 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC8.17□□□□□ -1.1
Cux1P53564 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC8.17□□□□□ -1.1
Cux1P53564 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC8.17□□□□□ -1.1
Cux1P53564 Gm16589-201ENSMUST00000159522 918 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm8214-201ENSMUST00000172123 351 ntBASIC8.17□□□□□ -1.1
Cux1P53564 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC8.17□□□□□ -1.1
Cux1P53564 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC8.17□□□□□ -1.1
Cux1P53564 Gm18150-201ENSMUST00000195341 645 ntBASIC8.17□□□□□ -1.1
Cux1P53564 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms