Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm14986-201ENSMUST00000121262 1002 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm23225-201ENSMUST00000158121 114 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm6061-201ENSMUST00000175860 492 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Mir6971-201ENSMUST00000183497 63 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm6693-201ENSMUST00000189583 813 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm9057-201ENSMUST00000198791 296 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 AC154481.1-201ENSMUST00000223532 331 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 AV026068-216ENSMUST00000223874 328 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 AV026068-218ENSMUST00000223980 575 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 AC163743.1-201ENSMUST00000224309 270 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm43665-201ENSMUST00000198672 1659 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gm2223-201ENSMUST00000112099 1350 ntBASIC8.2□□□□□ -1.1
Nkx2-3P97334 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Nkx2-3P97334 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nkx2-3P97334 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Ear-ps2-201ENSMUST00000100689 466 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm15016-201ENSMUST00000117300 720 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm11869-201ENSMUST00000118701 329 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm12618-201ENSMUST00000121754 483 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Trbv22-201ENSMUST00000191697 291 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Ass-ps1-201ENSMUST00000197717 761 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm44768-201ENSMUST00000205719 393 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm18774-201ENSMUST00000218269 601 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm29809-201ENSMUST00000218423 493 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm18592-201ENSMUST00000221529 276 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 AC154257.2-201ENSMUST00000224166 340 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 AC159979.1-201ENSMUST00000227927 342 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm23097-201ENSMUST00000083448 105 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm24490-201ENSMUST00000083803 98 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Olfr467-201ENSMUST00000084756 927 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 AC158388.2-201ENSMUST00000223665 1314 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm37914-201ENSMUST00000195317 2679 ntBASIC8.19□□□□□ -1.1
Nkx2-3P97334 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nkx2-3P97334 Gm14415-201ENSMUST00000118260 1578 ntBASIC8.18□□□□□ -1.1
Nkx2-3P97334 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Nkx2-3P97334 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nkx2-3P97334 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nkx2-3P97334 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nkx2-3P97334 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms