Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.2■□□□□ 0.5
Clcn2Q9R0A1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clcn2Q9R0A1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn2Q9R0A1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Gm4968-201ENSMUST00000071458 858 ntBASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn2Q9R0A1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn2Q9R0A1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Gm26524-201ENSMUST00000192339 390 ntBASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.15■□□□□ 0.5
Clcn2Q9R0A1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clcn2Q9R0A1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clcn2Q9R0A1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clcn2Q9R0A1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clcn2Q9R0A1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms