Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Gm8969-201ENSMUST00000199694 526 ntBASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Herpud1Q9JJK5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Herpud1Q9JJK5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 AV356131-201ENSMUST00000206201 750 ntBASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Herpud1Q9JJK5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Herpud1Q9JJK5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Herpud1Q9JJK5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Herpud1Q9JJK5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Herpud1Q9JJK5 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.78□□□□□ -0.04
Herpud1Q9JJK5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Herpud1Q9JJK5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Herpud1Q9JJK5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.78□□□□□ -0.04
Herpud1Q9JJK5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms