Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Gm13241-201ENSMUST00000094493 780 ntBASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chaf1bQ9D0N7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Gm26833-201ENSMUST00000180899 440 ntBASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chaf1bQ9D0N7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Chaf1bQ9D0N7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chaf1bQ9D0N7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chaf1bQ9D0N7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chaf1bQ9D0N7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms