Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Gtf2a1Q99PM3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2a1Q99PM3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.72■□□□□ 0.75
Gtf2a1Q99PM3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Gm45364-201ENSMUST00000210883 159 ntBASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2a1Q99PM3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2a1Q99PM3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Gm8503-201ENSMUST00000118131 455 ntBASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2a1Q99PM3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms