Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim8Q99PJ2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
Trim8Q99PJ2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trim8Q99PJ2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim8Q99PJ2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim8Q99PJ2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.44■□□□□ 0.38
Trim8Q99PJ2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim8Q99PJ2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim8Q99PJ2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Gm5874-201ENSMUST00000096101 508 ntBASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim8Q99PJ2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Gm13234-201ENSMUST00000120010 747 ntBASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim8Q99PJ2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms