Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr3Q99MB1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Tlr3Q99MB1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tlr3Q99MB1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr3Q99MB1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr3Q99MB1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tlr3Q99MB1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Gm12896-201ENSMUST00000118430 226 ntBASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tlr3Q99MB1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tlr3Q99MB1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr3Q99MB1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr3Q99MB1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr3Q99MB1 Mir6982-201ENSMUST00000184354 68 ntBASIC19.1■□□□□ 0.65
Tlr3Q99MB1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr3Q99MB1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr3Q99MB1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr3Q99MB1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tlr3Q99MB1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tlr3Q99MB1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.08■□□□□ 0.65
Tlr3Q99MB1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tlr3Q99MB1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tlr3Q99MB1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tlr3Q99MB1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr3Q99MB1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr3Q99MB1 Mtag2-201ENSMUST00000058665 714 ntBASIC19.08■□□□□ 0.64
Tlr3Q99MB1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr3Q99MB1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr3Q99MB1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tlr3Q99MB1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tlr3Q99MB1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tlr3Q99MB1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms