Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm44549-201ENSMUST00000208351 577 ntBASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb4Q91XX6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Rab3c-203ENSMUST00000224180 967 ntBASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.82■□□□□ 0.6
Pcdhgb4Q91XX6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.81■□□□□ 0.6
Pcdhgb4Q91XX6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb4Q91XX6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb4Q91XX6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Gm38285-201ENSMUST00000192928 922 ntBASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Gm5408-201ENSMUST00000197998 747 ntBASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdhgb4Q91XX6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms