Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Gm715-201ENSMUST00000117865 831 ntBASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Zfp783-201ENSMUST00000095946 670 ntBASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx41Q91VN6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.38■□□□□ 0.85
Ddx41Q91VN6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Mir1199-201ENSMUST00000117015 119 ntBASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Mtag2-201ENSMUST00000058665 714 ntBASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx41Q91VN6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx41Q91VN6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx41Q91VN6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx41Q91VN6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.36■□□□□ 0.85
Ddx41Q91VN6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.36■□□□□ 0.85
Ddx41Q91VN6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx41Q91VN6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx41Q91VN6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx41Q91VN6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx41Q91VN6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx41Q91VN6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Ddx41Q91VN6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx41Q91VN6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx41Q91VN6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms