Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CipcQ8R0W1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CipcQ8R0W1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CipcQ8R0W1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.85■□□□□ 0.29
CipcQ8R0W1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.85■□□□□ 0.29
CipcQ8R0W1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.84■□□□□ 0.29
CipcQ8R0W1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CipcQ8R0W1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.83■□□□□ 0.29
CipcQ8R0W1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CipcQ8R0W1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CipcQ8R0W1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CipcQ8R0W1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CipcQ8R0W1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CipcQ8R0W1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.82■□□□□ 0.28
CipcQ8R0W1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Gm11927-201ENSMUST00000118472 759 ntBASIC16.82■□□□□ 0.28
CipcQ8R0W1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.82■□□□□ 0.28
CipcQ8R0W1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Gm18666-201ENSMUST00000190039 958 ntBASIC16.82■□□□□ 0.28
CipcQ8R0W1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CipcQ8R0W1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Gm5643-201ENSMUST00000117081 966 ntBASIC16.81■□□□□ 0.28
CipcQ8R0W1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CipcQ8R0W1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.8■□□□□ 0.28
CipcQ8R0W1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Gm13158-201ENSMUST00000122007 736 ntBASIC16.8■□□□□ 0.28
CipcQ8R0W1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.8■□□□□ 0.28
CipcQ8R0W1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CipcQ8R0W1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 596.1 ms