Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.3■□□□□ 0.68
Trim68Q8K243 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim68Q8K243 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim68Q8K243 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim68Q8K243 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim68Q8K243 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim68Q8K243 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim68Q8K243 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim68Q8K243 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Trim68Q8K243 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim68Q8K243 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim68Q8K243 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.29■□□□□ 0.68
Trim68Q8K243 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.29■□□□□ 0.68
Trim68Q8K243 Gm11539-201ENSMUST00000119837 557 ntBASIC19.29■□□□□ 0.68
Trim68Q8K243 Gm13436-201ENSMUST00000120418 567 ntBASIC19.29■□□□□ 0.68
Trim68Q8K243 Gm13559-201ENSMUST00000120476 863 ntBASIC19.29■□□□□ 0.68
Trim68Q8K243 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim68Q8K243 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.29■□□□□ 0.68
Trim68Q8K243 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim68Q8K243 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.28■□□□□ 0.68
Trim68Q8K243 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim68Q8K243 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim68Q8K243 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trim68Q8K243 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim68Q8K243 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim68Q8K243 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim68Q8K243 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim68Q8K243 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim68Q8K243 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim68Q8K243 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim68Q8K243 Gm6659-201ENSMUST00000174752 547 ntBASIC19.27■□□□□ 0.68
Trim68Q8K243 Gm7889-201ENSMUST00000185591 958 ntBASIC19.27■□□□□ 0.68
Trim68Q8K243 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.27■□□□□ 0.68
Trim68Q8K243 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim68Q8K243 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim68Q8K243 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim68Q8K243 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim68Q8K243 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim68Q8K243 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.27■□□□□ 0.68
Trim68Q8K243 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim68Q8K243 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim68Q8K243 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim68Q8K243 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim68Q8K243 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim68Q8K243 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim68Q8K243 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim68Q8K243 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim68Q8K243 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.26■□□□□ 0.67
Trim68Q8K243 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim68Q8K243 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim68Q8K243 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim68Q8K243 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Trim68Q8K243 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim68Q8K243 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Trim68Q8K243 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim68Q8K243 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim68Q8K243 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim68Q8K243 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim68Q8K243 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim68Q8K243 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim68Q8K243 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim68Q8K243 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim68Q8K243 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim68Q8K243 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim68Q8K243 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms