Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc4Q8CG47 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Smc4Q8CG47 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smc4Q8CG47 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
Smc4Q8CG47 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.97■■□□□ 1.11
Smc4Q8CG47 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Smc4Q8CG47 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Gm15565-201ENSMUST00000118890 427 ntBASIC21.96■■□□□ 1.11
Smc4Q8CG47 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.96■■□□□ 1.11
Smc4Q8CG47 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.96■■□□□ 1.11
Smc4Q8CG47 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smc4Q8CG47 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Smc4Q8CG47 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc4Q8CG47 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc4Q8CG47 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc4Q8CG47 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.95■■□□□ 1.1
Smc4Q8CG47 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc4Q8CG47 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc4Q8CG47 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Smc4Q8CG47 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc4Q8CG47 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smc4Q8CG47 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.94■■□□□ 1.1
Smc4Q8CG47 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc4Q8CG47 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Smc4Q8CG47 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.93■■□□□ 1.1
Smc4Q8CG47 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Gm10517-202ENSMUST00000192970 758 ntBASIC21.93■■□□□ 1.1
Smc4Q8CG47 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Smc4Q8CG47 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.92■■□□□ 1.1
Smc4Q8CG47 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.92■■□□□ 1.1
Smc4Q8CG47 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Smc4Q8CG47 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc4Q8CG47 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc4Q8CG47 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms