Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.81■□□□□ 0.92
Shisa4Q8CA71 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.8■□□□□ 0.92
Shisa4Q8CA71 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa4Q8CA71 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Mir1199-201ENSMUST00000117015 119 ntBASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Shisa4Q8CA71 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Gm715-201ENSMUST00000117865 831 ntBASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Gm29791-202ENSMUST00000207888 369 ntBASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa4Q8CA71 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Gm11643-201ENSMUST00000119578 864 ntBASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa4Q8CA71 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.77■□□□□ 0.91
Shisa4Q8CA71 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa4Q8CA71 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa4Q8CA71 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.74■□□□□ 0.91
Shisa4Q8CA71 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms