Protein–RNA interactions for Protein: Q8C9W1

A430089I19Rik, RIKEN cDNA A430089I19 gene, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A430089I19RikQ8C9W1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
A430089I19RikQ8C9W1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
A430089I19RikQ8C9W1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
A430089I19RikQ8C9W1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
A430089I19RikQ8C9W1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.76■□□□□ 0.59
A430089I19RikQ8C9W1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
A430089I19RikQ8C9W1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
A430089I19RikQ8C9W1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Zfp783-201ENSMUST00000095946 670 ntBASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
A430089I19RikQ8C9W1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
A430089I19RikQ8C9W1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
A430089I19RikQ8C9W1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Flg-201ENSMUST00000050758 1488 ntBASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
A430089I19RikQ8C9W1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Gm5408-201ENSMUST00000197998 747 ntBASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
A430089I19RikQ8C9W1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
A430089I19RikQ8C9W1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms