Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Gm9013-201ENSMUST00000132939 882 ntBASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtp1Q8C8C1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtp1Q8C8C1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 Gm13474-201ENSMUST00000122466 815 ntBASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 Mzt1-203ENSMUST00000227948 952 ntBASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.37■□□□□ 0.85
Rtp1Q8C8C1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtp1Q8C8C1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rtp1Q8C8C1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Gm18958-201ENSMUST00000174258 762 ntBASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Gm43514-201ENSMUST00000198852 424 ntBASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtp1Q8C8C1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtp1Q8C8C1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rtp1Q8C8C1 Iqck-206ENSMUST00000208658 2891 ntBASIC20.33■□□□□ 0.85
Rtp1Q8C8C1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.33■□□□□ 0.85
Rtp1Q8C8C1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.33■□□□□ 0.85
Rtp1Q8C8C1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtp1Q8C8C1 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.33■□□□□ 0.84
Rtp1Q8C8C1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtp1Q8C8C1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Rtp1Q8C8C1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtp1Q8C8C1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtp1Q8C8C1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms