Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne3Q8BT60 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cpne3Q8BT60 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cpne3Q8BT60 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne3Q8BT60 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne3Q8BT60 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.18■□□□□ 0.34
Cpne3Q8BT60 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne3Q8BT60 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Gm18284-201ENSMUST00000172604 624 ntBASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.16■□□□□ 0.34
Cpne3Q8BT60 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms