Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdhr3Q8BL00 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdhr3Q8BL00 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdhr3Q8BL00 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdhr3Q8BL00 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Gm10493-201ENSMUST00000097270 612 ntBASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdhr3Q8BL00 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdhr3Q8BL00 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.52■□□□□ 0.08
Cdhr3Q8BL00 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdhr3Q8BL00 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cdhr3Q8BL00 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms