Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rbfox3Q8BIF2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rbfox3Q8BIF2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rbfox3Q8BIF2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rbfox3Q8BIF2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rbfox3Q8BIF2 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.73□□□□□ -0.21
Rbfox3Q8BIF2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rbfox3Q8BIF2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rbfox3Q8BIF2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Rbfox3Q8BIF2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rbfox3Q8BIF2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Gm10602-201ENSMUST00000098239 609 ntBASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rbfox3Q8BIF2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rbfox3Q8BIF2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rbfox3Q8BIF2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.68□□□□□ -0.22
Rbfox3Q8BIF2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rbfox3Q8BIF2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rbfox3Q8BIF2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rbfox3Q8BIF2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rbfox3Q8BIF2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms