Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc116Q80X53 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc116Q80X53 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc116Q80X53 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc116Q80X53 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Gm12933-201ENSMUST00000120203 872 ntBASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc116Q80X53 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc116Q80X53 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.39■□□□□ 0.38
Ccdc116Q80X53 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc116Q80X53 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc116Q80X53 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.38■□□□□ 0.37
Ccdc116Q80X53 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc116Q80X53 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc116Q80X53 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms