Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Srrm3Q80WV7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm3Q80WV7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm3Q80WV7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm3Q80WV7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Srrm3Q80WV7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Srrm3Q80WV7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.52■□□□□ 0.55
Srrm3Q80WV7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.52■□□□□ 0.55
Srrm3Q80WV7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Srrm3Q80WV7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.51■□□□□ 0.55
Srrm3Q80WV7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm3Q80WV7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm3Q80WV7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm3Q80WV7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms