Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp8Q80U87 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp8Q80U87 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
Usp8Q80U87 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp8Q80U87 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.86■□□□□ 0.45
Usp8Q80U87 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp8Q80U87 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp8Q80U87 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Usp8Q80U87 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Usp8Q80U87 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Usp8Q80U87 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.85■□□□□ 0.45
Usp8Q80U87 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Usp8Q80U87 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 AV356131-201ENSMUST00000206201 750 ntBASIC17.85■□□□□ 0.45
Usp8Q80U87 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp8Q80U87 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.84■□□□□ 0.45
Usp8Q80U87 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Usp8Q80U87 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.84■□□□□ 0.45
Usp8Q80U87 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp8Q80U87 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Usp8Q80U87 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Usp8Q80U87 Gm18284-201ENSMUST00000172604 624 ntBASIC17.84■□□□□ 0.45
Usp8Q80U87 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp8Q80U87 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Usp8Q80U87 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp8Q80U87 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp8Q80U87 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp8Q80U87 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp8Q80U87 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp8Q80U87 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp8Q80U87 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Usp8Q80U87 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp8Q80U87 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp8Q80U87 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp8Q80U87 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.83■□□□□ 0.44
Usp8Q80U87 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.83■□□□□ 0.44
Usp8Q80U87 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp8Q80U87 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp8Q80U87 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp8Q80U87 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp8Q80U87 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Gm10849-201ENSMUST00000100397 618 ntBASIC17.82■□□□□ 0.44
Usp8Q80U87 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp8Q80U87 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp8Q80U87 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp8Q80U87 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp8Q80U87 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp8Q80U87 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp8Q80U87 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp8Q80U87 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Usp8Q80U87 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp8Q80U87 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp8Q80U87 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp8Q80U87 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Usp8Q80U87 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp8Q80U87 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp8Q80U87 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Usp8Q80U87 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp8Q80U87 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Usp8Q80U87 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp8Q80U87 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms