Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Gm37722-201ENSMUST00000193757 208 ntBASIC15.48■□□□□ 0.07
Ubr5Q80TP3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ubr5Q80TP3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Gm26039-201ENSMUST00000158152 144 ntBASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Gm2651-201ENSMUST00000203560 838 ntBASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ubr5Q80TP3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr5Q80TP3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr5Q80TP3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ubr5Q80TP3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.46■□□□□ 0.07
Ubr5Q80TP3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr5Q80TP3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr5Q80TP3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr5Q80TP3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Ubr5Q80TP3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
Ubr5Q80TP3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ubr5Q80TP3 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.46■□□□□ 0.06
Ubr5Q80TP3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Ubr5Q80TP3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Ubr5Q80TP3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ubr5Q80TP3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ubr5Q80TP3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Gm11594-201ENSMUST00000122313 162 ntBASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ubr5Q80TP3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubr5Q80TP3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ubr5Q80TP3 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms