Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.29■□□□□ 0.36
RfflQ6ZQM0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RfflQ6ZQM0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Gm38205-201ENSMUST00000192243 258 ntBASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RfflQ6ZQM0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
RfflQ6ZQM0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RfflQ6ZQM0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RfflQ6ZQM0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RfflQ6ZQM0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RfflQ6ZQM0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RfflQ6ZQM0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RfflQ6ZQM0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Gm15546-201ENSMUST00000122095 826 ntBASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Smad6-203ENSMUST00000179458 273 ntBASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RfflQ6ZQM0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Gm12922-201ENSMUST00000120626 809 ntBASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RfflQ6ZQM0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RfflQ6ZQM0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Gm43137-201ENSMUST00000198052 594 ntBASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RfflQ6ZQM0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RfflQ6ZQM0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms