Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcd3Q6P9Z1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smarcd3Q6P9Z1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Gm22325-201ENSMUST00000158904 308 ntBASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcd3Q6P9Z1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcd3Q6P9Z1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcd3Q6P9Z1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Gm10493-201ENSMUST00000097270 612 ntBASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcd3Q6P9Z1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcd3Q6P9Z1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Gm6420-201ENSMUST00000193885 723 ntBASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcd3Q6P9Z1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd3Q6P9Z1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarcd3Q6P9Z1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcd3Q6P9Z1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd3Q6P9Z1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms