Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp140Q6NSQ5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp140Q6NSQ5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Zfp783-201ENSMUST00000095946 670 ntBASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp140Q6NSQ5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Gm5408-201ENSMUST00000197998 747 ntBASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp140Q6NSQ5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.03■□□□□ 0.48
Sp140Q6NSQ5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sp140Q6NSQ5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms