Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Notch3Q61982 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.64□□□□□ -0.23
Notch3Q61982 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.64□□□□□ -0.23
Notch3Q61982 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.64□□□□□ -0.23
Notch3Q61982 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Notch3Q61982 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.64□□□□□ -0.23
Notch3Q61982 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Notch3Q61982 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Notch3Q61982 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Flg-201ENSMUST00000050758 1488 ntBASIC13.63□□□□□ -0.23
Notch3Q61982 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Gm11927-201ENSMUST00000118472 759 ntBASIC13.63□□□□□ -0.23
Notch3Q61982 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.63□□□□□ -0.23
Notch3Q61982 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.63□□□□□ -0.23
Notch3Q61982 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Notch3Q61982 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Notch3Q61982 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.63□□□□□ -0.23
Notch3Q61982 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Notch3Q61982 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.63□□□□□ -0.23
Notch3Q61982 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.63□□□□□ -0.23
Notch3Q61982 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Notch3Q61982 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Notch3Q61982 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Notch3Q61982 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Notch3Q61982 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.62□□□□□ -0.23
Notch3Q61982 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.62□□□□□ -0.23
Notch3Q61982 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.62□□□□□ -0.23
Notch3Q61982 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Notch3Q61982 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Notch3Q61982 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.62□□□□□ -0.23
Notch3Q61982 Gm21362-201ENSMUST00000194272 928 ntBASIC13.62□□□□□ -0.23
Notch3Q61982 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Notch3Q61982 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Notch3Q61982 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Notch3Q61982 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.61□□□□□ -0.23
Notch3Q61982 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Notch3Q61982 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.61□□□□□ -0.23
Notch3Q61982 Gm11539-201ENSMUST00000119837 557 ntBASIC13.61□□□□□ -0.23
Notch3Q61982 Gm13436-201ENSMUST00000120418 567 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms